Source code for miop.image_helper.image_pair

# Copyright (c) 2025, Maxime Paschoud.
# All rights reserved.
#
# This source code is licensed under the BSD-style license found in the
# LICENSE file in the root directory of this source tree.
#
# (http://opensource.org/licenses/BSD-3-Clause)
#
# __author__ = "Maxime Paschoud, ETHZ: CMBM"
#

from .image import Image
import numpy as np
from .geometry import get_rotation_matrix


[docs]
class ImagePair:
    def __init__(self, img1: Image, img2: Image, tilt_axis):
        self.img1 = img1
        self.img2 = img2
        self.tilt_diff = img2.tilt - img1.tilt
        self.tilt_axis = tilt_axis
        if img1.tilt_rad != img2.tilt_rad:
            raise ValueError('one image has tilt in rad the other not')
        else:
            self.tilt_rad = img1.tilt_rad
    
    def __getitem__(self, index):
        if index == 0:
            return self.img1
        elif index == 1:
            return self.img2
        else:
            raise IndexError('Index for a pair should be 0 or 1')


[docs]
    def rotate(self, angle, rad=False):
        if self.tilt_axis is None:
            raise AttributeError('tilt_axis is None for this image pair.')
        self.img1.rotate(angle)
        self.img2.rotate(angle)
        self.tilt_axis = self.tilt_axis @ get_rotation_matrix([0.,0,1], angle, rad=rad).T



[docs]
    def rotate_by_transpose(self):
        self.img1.rotate_by_transpose()
        self.img2.rotate_by_transpose()
        self.tilt_axis = self.tilt_axis @ get_rotation_matrix([0.,0,1], 90, rad=False).T